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| autosearchEx | Greedy search |
| BootstrapBN | Bootstrap Bayesian networks |
| CalcEdgeSup | Calculate Edge Support |
| ConstGraphMatrix | Create adjacent matrix |
| DisplayGraph | Display network graph |
| EachGeneDataDistView | Histgram of gene distribution |
| EachMicroarrayDataDistView | Histgram of one microarray data distribution |
| FinalImpute | Impute missing value |
| heuristicEx | Greedy search |
| LLSimpute | local least squares imputation |
| PrepareCompData | Prepare complete database |
| total.data | Spellman micorarray data set |
| xCODENSE | Mine coherent dense subgraphs |