Plant miRNA research group@Ming Chen' Lab PmiRKB Instructions
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SNP  > Arabidopsis thaliana  > ath-miR2935
Penalty:0.00.51.01.52.02.53.03.54.0≥4.5
miRNA 5'- UGGAAUCACACGGUCGUCAUUC -3' Col-0
UGGAAUCACACGAUCGUCAUUC Bay-0
UGGAAUCACACGGUCGUCAUUC Bur-0
UGGAAUCACACGGUCGUCAUUC Cvi-0
UGGAAUCACACGGUCGUCAUUC Ler-1
UGGAAUCACACGGUCGUCAUUC Sha
UGGAAUCACACGGUCGUCAUUC Tsu-1
Pre-miRNAView SNPs in this pre-miRNA
Target
AT1G12310.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 |||| :| |:|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
 |||| :|  :|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 |||| :| |:|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 |||| :| |:|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 |||| :| |:|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 |||| :| |:|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 |||| :| |:|||||||||| 
AAAUGUUGUCUGUGUGAUUCCU
-5'
-3'
Tsu-1
Target
AT1G21430.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|||||:|||  |||||||||||
GAAUGGCGAAGGUGUGAUUCCA
-5'
-3'
Tsu-1
Target
AT1G77320.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||||  ||||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
||||||  | ||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||||  ||||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||||  ||||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||||  ||||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||||  ||||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||||  ||||||||:|||| 
GAAUGAGCACCGUGUGGUUCCU
-5'
-3'
Tsu-1
Target
AT2G06760.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||:|||:||:|| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
||:|||:||||| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||:|||:||:|| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||:|||:||:|| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||:|||:||:|| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||:|||:||:|| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||:|||:||:|| |||:|||::
GAGUGAUGAUCGAGUGGUUCUG
-5'
-3'
Tsu-1
Target
AT2G20310.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :||||||||:||||||||:::
UGAUGACGACUGUGUGAUUUUG
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
 :||||||| :||||||||:::
UGAUGACGACUGUGUGAUUUUG
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
UGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
UGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :||||||||:||||||||:::
UGAUGACGACUGUGUGAUUUUG
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :||||||||:||||||||:::
UGAUGACGACUGUGUGAUUUUG
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :||||||||:||||||||:::
UGAUGACGACUGUGUGAUUUUG
-5'
-3'
Tsu-1
Target
AT2G37650.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||  :|||||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
||||  :|| ||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||  :|||||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||  :|||||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||  :|||||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||  :|||||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
||||  :|||||||||:|||||
GAAUCUUGACCGUGUGGUUCCA
-5'
-3'
Tsu-1
Target
AT2G46700.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
|:||||: :|||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Tsu-1
Target
AT2G46700.2
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
|:||||: :|||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||: ::||||||||||| 
GGAUGAUAGUCGUGUGAUUCCU
-5'
-3'
Tsu-1
Target
AT4G09440.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
|:||||||| : |||||||| |
GGAUGACGAGUUUGUGAUUC-A
-5'
-3'
Tsu-1
Target
AT4G28690.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
 :||||||||:||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||::||||||||:::
CGAUGACGAUUGUGUGAUUUUG
-5'
-3'
Tsu-1
Target
AT5G37920.1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||:: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Col-0
3'-
5'-
CUUACUGCUAGCACACUAAGGU
 :||||||||: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Bay-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||:: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Bur-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||:: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Cvi-0
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||:: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Ler-1
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||:: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Sha
3'-
5'-
CUUACUGCUGGCACACUAAGGU
 :|||||||:: ||||||||| 
UGAUGACGAUUUUGUGAUUCCU
-5'
-3'
Tsu-1