Plant miRNA research group@Ming Chen' Lab PmiRKB Instructions
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SNP  > Oryza sativa  > osa-miR2094-3p
Penalty:0.00.51.01.52.02.53.03.54.0≥4.5
miRNA 5'- CAGAGCUGUGGCAUCCACGUCG -3' Nipponbare
CAGAGCUGCGGCAUCCACGUCG 93-11
CAGAGCUGUGGCAUCCACGUCG Aswina
CAGAGCUGUGGCAUCCACGUCG Azucena
CAGAGCUGUGGCAUCCACGUCG Cypress
CAGAGCUGUGGCAUCCACGUCG Dom-Sufid
CAGAGCUGUGGCAUCCACGUCG Dular
CAGAGCUGUGGCAUCCACGUCG FR13 A
CAGAGCUGUGGCAUCCACGUCG IR64-21
CAGAGCUGUGGCAUCCACGUCG Li-Jiang-Xin-Tuan-Hei-Gu
CAGAGCUGUGGCAUCCACGUCG M 202
CAGAGCUGUGGCAUCCACGUCG Minghui 63
CAGAGCUGUGGCAUCCACGUCG Moroberekan
CAGAGCUGUGGCAUCCACGUCG N 22
CAGAGCUGUGGCAUCCACGUCG Pokkali
CAGAGCUGUGGCAUCCACGUCG Rayada
CAGAGCUGUGGCAUCCACGUCG Sadu-Cho
CAGAGCUGUGGCAUCCACGUCG Shan-Huang Zhan-2
CAGAGCUGUGGCAUCCACGUCG Swarna
CAGAGCUGUGGCAUCCACGUCG Tainung 67
CAGAGCUGUGGCAUCCACGUCG Zhenshan 97B
Pre-miRNAView SNPs in this pre-miRNA
Target
OS01G26370.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
||:|||||||||: :||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||||||:|:||| |  
CGGCGUGGAUGCUAUAGCCCCU
-5'
-3'
Zhenshan 97B
Target
OS01G36850.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Zhenshan 97B
Target
OS02G37690.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
||: ||||:|||| ||||||  
CGGGGUGGGUGCCCCAGCUCAA
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||: ||||:|||| ||||||  
CGGAGUGGGUGCCCCAGCUCAA
-5'
-3'
Zhenshan 97B
Target
OS02G46930.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
 ||: | |||||| |||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 ||: | ||||||||||:||||
AGAUAUUGAUGCCACAGUUCUG
-5'
-3'
Zhenshan 97B
Target
OS02G48010.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 |:| |||||||| :|||||| 
GGGCUUGGAUGCCCUAGCUCUU
-5'
-3'
Zhenshan 97B
Target
OS03G53440.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
| |:||||| ||:||||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
| |:||||| ||::|||:||||
C-AUGUGGACGCUGCAGUUCUG
-5'
-3'
Zhenshan 97B
Target
OS04G57860.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
|| |||||||| | |:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
|| |||||||| |||:|||| |
CGUCGUGGAUGACACGGCUC-G
-5'
-3'
Zhenshan 97B
Target
OS05G07240.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
||:|||||| ||| || ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:|||||| |||||| ||| |
CGGCGUGGAGGCCACACCUC-G
-5'
-3'
Zhenshan 97B
Target
OS05G13800.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
:||||||| ||:| |||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
:||||||| ||:|||||:| ||
UGACGUGGUUGUCACAGUU-UG
-5'
-3'
Zhenshan 97B
Target
OS07G13430.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
  || |||||||: ::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
  || |||||||:|::|:||||
GAACAUGGAUGCUAUGGUUCUG
-5'
-3'
Zhenshan 97B
Target
OS08G08130.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
 || |||||| || ||||||| 
AGAGGUGGAUUCCCCAGCUCUU
-5'
-3'
Zhenshan 97B
Target
OS08G21940.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
||:||| |||| | |:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||:||| |||| |||:|||| |
CGGCGUCGAUGGCACGGCUCGG
-5'
-3'
Zhenshan 97B
Target
OS10G05430.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
||||||||| || ||:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
||||||||| || :|:|||| |
CGACGUGGAGGCGGCGGCUCAG
-5'
-3'
Zhenshan 97B
Target
OS11G37880.1
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Nipponbare
3'-
5'-
GCUGCACCUACGGCGUCGAGAC
: :|| |||||||| |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
93-11
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Aswina
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Azucena
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Cypress
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Dom-Sufid
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Dular
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
FR13 A
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
IR64-21
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Li-Jiang-Xin-Tuan-Hei-Gu
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
M 202
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Minghui 63
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Moroberekan
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
N 22
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Pokkali
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Rayada
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Sadu-Cho
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Shan-Huang Zhan-2
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Swarna
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Tainung 67
3'-
5'-
GCUGCACCUACGGUGUCGAGAC
: :|| |||||||: |||||||
UUGCGAGGAUGCCGGAGCUCUG
-5'
-3'
Zhenshan 97B