RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

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Example: LOC_Os01g49190      

Update Info

  • 2016-12-11
    miRNA target gene was added.
  • 2013-6-26
    RiceNetDB website completed.
  • 2013-4-9
    The second stage of curation finished.
  • 2013-1-21
    RiceNetDB data updated.
  • 2012-10-9
    The RiceNetDB website was initially constructed.
  • 2012-9-20
    The first stage of curation done.
  • 2012-7-9
    The RiceNets draft constructed.
  • 2012-6-22
    Metabolic Network built.
  • 2012-2-17
    Protein-Protein interaction network finished.
  • 2011-12-22
    Gene regulatory network constructed.
  • 2011-10-29
    The RiceNets project launched.

Citation: Lili Liu, Qian Mei, Zhenning Yu, Tianhao Sun, Zijun Zhang, Ming Chen* (2013) An Integrative Bioinformatics Framework for Genome-scale Multiple Level Network Reconstruction of Rice. Journal of Integrative Bioinformatics, 10(2): 223.
Contact: mchen@zju.edu.cn; llliu@zju.edu.cn
© since 2011 Ming Chen's Lab, Zhejiang University