RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os01g49190.1 View Network Show in Genome Browser |
Other Names | Os01g0685800 |
Description | ATP synthase, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28277699-28282019 Nucleotide Length: 1674 |
Protein-coding | LOC_Os01g49190 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0006810 | transport | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005215 | transporter activity | Molecular Function | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005739 | mitochondrion | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g08350 LOC_Os01g42650 LOC_Os01g38970 LOC_Os01g19470 LOC_Os01g18050 LOC_Os01g17430 LOC_Os01g16960 LOC_Os01g47660 LOC_Os01g08560 LOC_Os01g25100 LOC_Os01g46070 More.. |
Downstream Genes | LOC_Os09g08910 LOC_Os10g17280 LOC_Os06g43850 LOC_Os07g31300 LOC_Os03g58204 LOC_Os07g32880 LOC_Os07g08330 LOC_Os06g37180 LOC_Os01g58000 LOC_Os12g19430 LOC_Os03g48471 More.. |
Pathways | |
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KEGG Pathways | rn01100 rn00680 rn00190 rn00195 |
Metacyc Pathways | PWY-6126 |
Database Links | |
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Gramene | LOC_Os01g49190.1 |
Rice Genome Annotation | LOC_Os01g49190.1 |
Ricechip | LOC_Os01g49190.1 |
KEGG | osa:4324151 dosa:Os01t0685800-01 |
Entrez-Gene | 4324151 |