ncRNA Database

PlantNATsDB

Plant Natural Antisense Transcripts DataBase

PceRBase

Plant Competing Endogenous RNA DataBase

CircFunBase

A comprehensive repository of functional circular RNAs (circRNAs) in both model plants and animals

LeafcircBase

The Leaf CircRNA Resource

PncStress

A manually curated archive of experimentally validated stress-responsive ncRNAs in plant. The database contains that have been experimentally verified response to different kind of abiotic or biotic stress.

NChub

ncRNA Hub

PlncRNADB

PlncRNADB: repository of lncRNAs in Plant

PlantCircNet

plant circRNA network


Plant Database

RiceNetDB

RiceNetDB

CropGF

CropGF is a comprehensive database of crucial physiological traits of crops.

CakorDB

A Comprehensive Resource Database for Caragana korshinskii genomics.

SoyOD

An integrated omics database for soybean germplasm and molecular breeding


Disease Database

NDAtlas

Neurodegenerative Disease Atlas

HALD

A platform for exploring the human aging and longevity knowledge graph based on biomedical literature mining.

OverCovid

Covid-19 Bioinformatic Resources


Tools

Mtide

MTide: an integrated tool for the identification of miRNA-target interaction in plants

PSI

Plant Subcellular-localization Integrative predictor

CircPro

CircPro: an integrated tool for the identification of circRNAs with protein-coding potential

DaTo

DaTo - The atlas of biological Database and Tools

CloneAssistant

CloneAssistant 1.0: a standalone software for automated cloning primer design

MiRNA Digger

MiRNA Digger

CircPlant

Plant circRNA identification tool

dscBLAST

developmental single-cell Basic Local Alignment Search Tool

RepLoc

Sequence repetitiveness quantification and de novo repeat detection


Single Cell Atlas

Cell Landscape

A database of single cell RNA sequencing atlas from multiple species.

MCA

Mouse Cell Atlas

ZCL

Zebrafish Cell Landscape

ECL

Earthworm Cell Landscape

ACA

Axolotl Cell Atlas

HCL

Human Cell Landscape

XCL

Xenopus Cell Landscape


Education

Biooj

Bioinformatics Programming Training Platform