Data Download
PepAnno Dataset
| FUNCTION | DETAILS | FORMAT | ACTION |
|---|---|---|---|
| AMP | TRAIN: 8719 pos + 8719 neg. TEST: 1536 pos + 1536 neg | csv | Train Test |
| ACP | TRAIN: 1176 pos + 1176 neg. TEST: 610 pos + 2760 neg | csv | Train Test |
| AVP | TRAIN: 2290 pos + 2311 neg. TEST: 417 pos + 395 neg | csv | Train Test |
| AIP | TRAIN: 1258 pos + 1887 neg. TEST: 420 pos + 629 neg | csv | Train Test |
| AHP | TRAIN: 856 pos + 856 neg. TEST: 214 pos + 363 neg | csv | Train Test |
| AAP | TRAIN: 107 pos + 107 neg. TEST: 28 pos + 28 neg | csv | Train Test |
| CPP | TRAIN: 844 pos + 838 neg. TEST: 90 pos + 98 neg | csv | Train Test |
AMP Dataset
| NAME | INFO | FORMAT | ACTION |
|---|---|---|---|
| sAMPpred-GAT: Train datasets | |||
| APD3 | The training datasets of APD3 contain pretraining, training, and validation fasta data. | zip | Download |
| CAMP | The training datasets of CAMP contain pretraining, training, and validation fasta data. | zip | Download |
| DBAASP | The training datasets of DBAASP contain pretraining, training, and validation fasta data. | zip | Download |
| dbAMP | The training datasets of dbAMP contain pretraining, training, and validation fasta data. | zip | Download |
| DRAMP | The training datasets of DRAMP contain pretraining, training, and validation fasta data. | zip | Download |
| LAMP | The training datasets of LAMP contain pretraining, training, and validation fasta data. | zip | Download |
| XUAMP | The training datasets of XUAMP contain pretraining, training, and validation fasta data. | zip | Download |
| YADAMP | The training datasets of YADAMP contain pretraining, training, and validation fasta data. | zip | Download |
| sAMPpred-GAT: Independent test datasets | |||
| DBAASP | The independent test datasets of DBAASP contain AMP and non-AMP fasta data. | zip | Download |
| XUAMP | The independent test datasets of XUAMP contain AMP and non-AMP fasta data. | zip | Download |
| Other Six Datasets | The independent test datasets of APD3, CAMP, dbAMP, DRAMP, LAMP, and YADAMP contain AMP and non-AMP fasta data. | zip | Download |
| amPEPpy: | |||
| training data | The training data of amPEPpy. | zip | Download |
| diff-amp: | |||
| AMPdb_data | The data of diff-amp. | csv | Download |
| Training data | The traning data of diff-amp. | csv | Download |
| Validation data | The validation data of diff-amp. | csv | Download |
ACP Dataset
AVP Dataset
| NAME | INFO | FORMAT | ACTION |
|---|---|---|---|
| ACVPred | |||
| ACVPs | The ACVPs data of ACVPred. | csv | Download |
| AVPs | The AVPs data of ACVPred. | csv | Download |
| Independent test | The independent test data of ACVPred. | csv | Download |
| nonAVPs | The non-AVPs data of ACVPred. | csv | Download |
| FFMAVP: Main datasets | |||
| main datasets | The main datasets of FFMAVP. | zip | Download |
| FFMAVP: Train datasets | |||
| firstStage train | The traning data of the first stage of FFMAVP. | faa | Download |
| secondStage train | The training data of the second stage of FFMAVP contain fasta data and label data. | zip | Download |
| FFMAVP: Test datasets | |||
| firstStage test | The testing data of the first stage of FFMAVP. | zip | Download |
| secondStage train | The testing data of the second stage of FFMAVP contain fasta data and label data. | zip | Download |
| MIMML | |||
| Anti-viral Peptide | The AVP data of MIMML. | zip | Download |
AIP Dataset
| NAME | INFO | FORMAT | ACTION |
|---|---|---|---|
| PepNet | |||
| AIP datasets | The training, testing, and validation data of PepNet contain data from AIPStack, BertAIP, and IF_AIP. | zip | Download |
| PREDAIP | |||
| train positive | The positive training data of PREDAIP. | txt | Download |
| train negative | The negative training data of PREDAIP. | txt | Download |
| MIMML | |||
| Anti-inflammatory Peptide | The AIP data of MIMML. | zip | Download |
AAP Dataset
CPP Dataset
| NAME | INFO | FORMAT | ACTION |
|---|---|---|---|
| SiameseCPP | |||
| SiameseCPP_dataset | The training and independent testing datasets of SiameseCPP. | zip | Download |
Other Dataset
| NAME | INFO | FORMAT | ACTION |
|---|---|---|---|
| MIMML | |||
| Anti-bacterial Peptide | The ABP data of MIMML Finetune Dataset. | zip | Download |
| Anti-fungal Peptide | The AFP data of MIMML Finetune Dataset. | zip | Download |
| Anti-tubercular Peptide | The ATP data of MIMML Finetune Dataset. | zip | Download |
| Blood–Brain Barrier Penetrating Peptide | The B3PP data of MIMML Finetune Dataset. | zip | Download |
| Bitter Peptide | The BP data of MIMML Finetune Dataset. | zip | Download |
| DPP-IV inhibitory Peptide | The DPP-IV data of MIMML Finetune Dataset. | zip | Download |
| Neuro-peptide | The NP data of MIMML Finetune Dataset. | zip | Download |
| Polystyrene Surface-Binding Peptide | The PSBP data of MIMML Finetune Dataset. | zip | Download |
| Quorum Sensing Peptide | The QSP data of MIMML Finetune Dataset. | zip | Download |
| Tumor Homing Peptide | The THP data of MIMML Finetune Dataset. | zip | Download |
| Umami Peptide | The UP data of MIMML Finetune Dataset. | zip | Download |