RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
---|---|
Locus Name | LOC_Os01g24690.1 View Network Show in Genome Browser |
Other Names | Os01g0348700 |
Description | 60S ribosomal protein L23A, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 13896291-13898264 Nucleotide Length: 459 |
Protein-coding | LOC_Os01g24690 |
Gene Ontology Classification | ||||
---|---|---|---|---|
GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0003723 | RNA binding | Molecular Function | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005622 | intracellular | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
---|---|
Upstream Genes | LOC_Os01g10820 LOC_Os01g19840 LOC_Os01g16890 LOC_Os01g22490 LOC_Os01g04730 LOC_Os01g03070 LOC_Os01g07080 LOC_Os01g17330 LOC_Os01g10050 LOC_Os01g12090 |
Downstream Genes | LOC_Os02g14059 LOC_Os01g54870 LOC_Os05g11710 LOC_Os03g37970 LOC_Os06g35730 LOC_Os06g02510 LOC_Os05g49030 LOC_Os01g47660 LOC_Os12g38000 LOC_Os03g40180 LOC_Os05g19370 More.. |
miRNA Regulations | |
---|---|
miRNAs | osa-miR5505 |
Database Links | |
---|---|
Gramene | LOC_Os01g24690.1 |
Rice Genome Annotation | LOC_Os01g24690.1 |
Ricechip | LOC_Os01g24690.1 |
KEGG | osa:4326469 dosa:Os01t0348700-01 |
Entrez-Gene | 4326469 |