RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g36930.1 View Network Show in Genome Browser |
| Other Names | Os01g0550100 |
| Description | ubiquitin carboxyl-terminal hydrolase 6, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 20581615-20589583 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os01g36930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16190 LOC_Os01g32800 LOC_Os01g22490 LOC_Os01g16640 LOC_Os01g18050 LOC_Os01g33080 |
| Downstream Genes | LOC_Os05g30800 LOC_Os02g11050 LOC_Os06g09290 LOC_Os02g54340 LOC_Os03g13970 LOC_Os03g63430 LOC_Os07g49150 LOC_Os02g21970 LOC_Os03g18690 LOC_Os04g56646 LOC_Os04g40850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g36930.1 |
| Rice Genome Annotation | LOC_Os01g36930.1 |
| Ricechip | LOC_Os01g36930.1 |
| KEGG | osa:4326194 dosa:Os01t0550100-01 |
| Entrez-Gene | 4326194 |