RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42520.1 View Network Show in Genome Browser |
| Other Names | Os01g0611000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24181111-24184171 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os01g42520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13320 LOC_Os01g37590 LOC_Os01g18050 LOC_Os01g27140 |
| Downstream Genes | LOC_Os05g31280 LOC_Os10g25780 LOC_Os01g52770 LOC_Os08g39550 LOC_Os06g05550 LOC_Os04g38570 LOC_Os01g59870 LOC_Os03g50810 LOC_Os11g33270 LOC_Os03g08790 LOC_Os01g58550 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42520.1 |
| Rice Genome Annotation | LOC_Os01g42520.1 |
| Ricechip | LOC_Os01g42520.1 |
| KEGG | osa:4325311 dosa:Os01t0611000-01 |
| Entrez-Gene | 4325311 |