RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
---|---|
Locus Name | LOC_Os01g49430.1 View Network Show in Genome Browser |
Other Names | Os01g0688900 |
Description | DnaK family protein, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28425815-28427562 Nucleotide Length: 1620 |
Protein-coding | LOC_Os01g49430 |
Gene Ontology Classification | ||||
---|---|---|---|---|
GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0019538 | protein metabolic process | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005737 | cytoplasm | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005576 | extracellular region | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
---|---|
Upstream Genes | LOC_Os01g32870 LOC_Os01g42190 LOC_Os01g17030 LOC_Os01g27740 LOC_Os01g13760 LOC_Os01g37560 LOC_Os01g33800 LOC_Os01g01160 LOC_Os01g38970 LOC_Os01g06454 |
Downstream Genes | LOC_Os06g02620 LOC_Os02g43930 LOC_Os12g07060 LOC_Os04g46390 LOC_Os03g44620 LOC_Os09g32050 LOC_Os05g46620 LOC_Os03g57340 LOC_Os05g06440 LOC_Os03g61730 LOC_Os02g35000 More.. |
miRNA Regulations | |
---|---|
miRNAs | osa-miR2925 |
Database Links | |
---|---|
Gramene | LOC_Os01g49430.1 |
Rice Genome Annotation | LOC_Os01g49430.1 |
Ricechip | LOC_Os01g49430.1 |
KEGG | dosa:Os01t0688900-00 |