RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51020.1 View Network Show in Genome Browser |
| Other Names | Os01g0706500 |
| Description | 60S ribosomal protein L28-1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29314183-29316912 Nucleotide Length: 438 |
| Protein-coding | LOC_Os01g51020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19840 LOC_Os01g25610 LOC_Os01g22490 LOC_Os01g04730 LOC_Os01g10820 LOC_Os01g16890 LOC_Os01g47660 LOC_Os01g49290 LOC_Os01g33030 LOC_Os01g48770 LOC_Os01g03070 More.. |
| Downstream Genes | LOC_Os06g02510 LOC_Os05g40820 LOC_Os01g67134 LOC_Os01g59990 LOC_Os07g07709 LOC_Os03g58050 LOC_Os05g28750 LOC_Os03g21940 LOC_Os05g41110 LOC_Os08g03640 LOC_Os08g39500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51020.1 |
| Rice Genome Annotation | LOC_Os01g51020.1 |
| Ricechip | LOC_Os01g51020.1 |
| KEGG | osa:4327674 dosa:Os01t0706500-00 |
| Entrez-Gene | 4327674 |