RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01230.1 View Network Show in Genome Browser |
| Other Names | Os02g0102400 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 126771-130189 Nucleotide Length: 1506 |
| Protein-coding | LOC_Os02g01230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15290 LOC_Os01g10820 LOC_Os01g62210 LOC_Os01g42640 LOC_Os01g14830 LOC_Os01g42980 LOC_Os01g57910 LOC_Os01g33030 LOC_Os01g64090 LOC_Os01g61814 LOC_Os01g71230 More.. |
| Downstream Genes | LOC_Os07g07709 LOC_Os03g58050 LOC_Os02g27760 LOC_Os02g06700 LOC_Os07g10720 LOC_Os03g48840 LOC_Os02g33140 LOC_Os03g61260 LOC_Os09g17840 LOC_Os09g17830 LOC_Os02g46440 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR2104 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01230.1 |
| Rice Genome Annotation | LOC_Os02g01230.1 |
| Ricechip | LOC_Os02g01230.1 |
| KEGG | osa:4327989 dosa:Os02t0102400-01 |
| Entrez-Gene | 4327989 |