RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01510.1 View Network Show in Genome Browser |
| Other Names | Os02g0105400 |
| Description | lactate/malate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 295302-299174 Nucleotide Length: 1179 |
| Protein-coding | LOC_Os02g01510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67860 LOC_Os01g59990 LOC_Os01g22490 LOC_Os01g61814 LOC_Os01g67134 LOC_Os01g15260 LOC_Os01g46070 LOC_Os01g51120 LOC_Os01g16960 LOC_Os01g61380 LOC_Os01g50360 More.. |
| Downstream Genes | LOC_Os06g40640 LOC_Os07g10660 LOC_Os05g33380 LOC_Os10g33800 LOC_Os08g44810 LOC_Os04g50990 LOC_Os10g08022 LOC_Os07g12250 LOC_Os02g47140 LOC_Os05g51700 LOC_Os05g40820 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00620 rn01100 rn01110 rn01120 rn00270 rn00640 |
| Metacyc Pathways | P124-PWY ANAEROFRUCAT-PWY PWY-3801 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01510.1 |
| Rice Genome Annotation | LOC_Os02g01510.1 |
| Ricechip | LOC_Os02g01510.1 |
| KEGG | osa:4328012 dosa:Os02t0105400-01 |
| Entrez-Gene | 4328012 |