RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12900.1 View Network Show in Genome Browser |
| Other Names | Os02g0222100 |
| Description | cysteine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6810648-6814112 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os02g12900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01302 LOC_Os01g46980 LOC_Os02g07870 LOC_Os02g05330 LOC_Os01g37837 LOC_Os01g55820 LOC_Os02g12794 LOC_Os02g12800 LOC_Os01g12260 LOC_Os01g14950 LOC_Os01g59150 More.. |
| Downstream Genes | LOC_Os04g32880 LOC_Os04g54800 LOC_Os06g12150 LOC_Os02g51410 LOC_Os03g50510 LOC_Os03g63940 LOC_Os06g07960 LOC_Os06g07860 LOC_Os03g47120 LOC_Os06g20390 LOC_Os04g46930 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn00920 rn01100 rn01120 |
| Metacyc Pathways | CYSTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12900.1 |
| Rice Genome Annotation | LOC_Os02g12900.1 |
| Ricechip | LOC_Os02g12900.1 |
| KEGG | osa:9266140 dosa:Os02t0222100-01 |
| Entrez-Gene | 9266140 |