RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g42040.1 View Network Show in Genome Browser
Other Names	Os02g0631601,Os02g0631500
Description	MIF4G domain containing protein, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 25273044-25284061 Nucleotide Length: 3315
Protein-coding	LOC_Os02g42040

Gene Ontology Classification
GO	Name	Type	Code
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003723	RNA binding	Molecular Function	IEA
GO:0003723	RNA binding	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005575	cellular_component	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g65220 LOC_Os01g67134 LOC_Os01g58220 LOC_Os02g02360 LOC_Os02g07890 LOC_Os02g05330 LOC_Os01g38970 LOC_Os01g62370 LOC_Os02g02424 LOC_Os02g07260
Downstream Genes	LOC_Os07g31340 LOC_Os04g35920 LOC_Os07g36940 LOC_Os03g22570 LOC_Os12g15420 LOC_Os05g05450 LOC_Os07g08660 LOC_Os03g58430 LOC_Os11g05562 LOC_Os08g44480 LOC_Os09g39540 More..

miRNA Regulations
miRNAs	osa-miR414 osa-miR815a osa-miR815b osa-miR815c

Database Links
Gramene	LOC_Os02g42040.1
Rice Genome Annotation	LOC_Os02g42040.1
Ricechip	LOC_Os02g42040.1
KEGG	osa:4330058 dosa:Os02t0631601-00 dosa:Os02t0631500-00
Entrez-Gene	4342195