RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g50620.1 View Network Show in Genome Browser |
| Other Names | Os02g0739600 |
| Description | dehydrogenase E1 component domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30918757-30922964 Nucleotide Length: 1173 |
| Protein-coding | LOC_Os02g50620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01500 LOC_Os01g22520 LOC_Os02g10070 LOC_Os02g32490 LOC_Os01g16960 LOC_Os01g49190 LOC_Os01g38970 LOC_Os01g56310 LOC_Os02g32120 LOC_Os01g21160 LOC_Os01g51380 More.. |
| Downstream Genes | LOC_Os09g33500 LOC_Os08g42410 LOC_Os03g44300 LOC_Os12g42230 LOC_Os06g01630 LOC_Os07g22720 LOC_Os09g24320 LOC_Os12g08170 LOC_Os06g30460 LOC_Os08g33440 LOC_Os07g49520 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00020 rn00620 rn00650 rn01110 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g50620.1 |
| Rice Genome Annotation | LOC_Os02g50620.1 |
| Ricechip | LOC_Os02g50620.1 |
| KEGG | osa:4330673 dosa:Os02t0739600-01 |
| Entrez-Gene | 4330673 |