RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54470.1 View Network Show in Genome Browser |
| Other Names | Os02g0785800 |
| Description | 60S ribosomal protein L35a-3, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33359344-33360025 Nucleotide Length: 339 |
| Protein-coding | LOC_Os02g54470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27760 LOC_Os02g40880 LOC_Os01g19840 LOC_Os02g14059 LOC_Os01g59990 LOC_Os02g34460 LOC_Os01g04730 LOC_Os01g10820 LOC_Os02g47140 LOC_Os01g61814 LOC_Os02g18380 More.. |
| Downstream Genes | LOC_Os07g10720 LOC_Os05g28750 LOC_Os08g02400 LOC_Os05g30530 LOC_Os03g31090 LOC_Os04g42270 LOC_Os08g02410 LOC_Os04g35090 LOC_Os05g40820 LOC_Os12g05430 LOC_Os07g12250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54470.1 |
| Rice Genome Annotation | LOC_Os02g54470.1 |
| Ricechip | LOC_Os02g54470.1 |
| KEGG | osa:4330946 dosa:Os02t0785800-01 |
| Entrez-Gene | 4330946 |