RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01900.1 View Network Show in Genome Browser |
| Other Names | Os03g0109500 |
| Description | 40S ribosomal protein S17, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 559227-559947 Nucleotide Length: 435 |
| Protein-coding | LOC_Os03g01900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61814 LOC_Os01g04730 LOC_Os02g14059 LOC_Os02g13530 LOC_Os01g10820 LOC_Os01g52490 LOC_Os02g01332 LOC_Os02g02130 LOC_Os01g25610 LOC_Os01g16890 LOC_Os02g56960 More.. |
| Downstream Genes | LOC_Os03g04750 LOC_Os10g32820 LOC_Os03g60400 LOC_Os04g42380 LOC_Os11g29190 LOC_Os03g10340 LOC_Os12g05430 LOC_Os09g08430 LOC_Os07g08330 LOC_Os07g05580 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01900.1 |
| Rice Genome Annotation | LOC_Os03g01900.1 |
| Ricechip | LOC_Os03g01900.1 |
| KEGG | osa:4331346 dosa:Os03t0109500-00 |
| Entrez-Gene | 4331346 |