RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03770.1 View Network Show in Genome Browser |
| Other Names | Os03g0129900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1685487-1689540 Nucleotide Length: 330 |
| Protein-coding | LOC_Os03g03770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52214 LOC_Os01g49190 LOC_Os01g70960 LOC_Os01g61380 LOC_Os01g46070 LOC_Os02g57180 LOC_Os02g32120 LOC_Os01g58380 LOC_Os01g22520 LOC_Os01g16900 LOC_Os02g31040 More.. |
| Downstream Genes | LOC_Os04g24520 LOC_Os07g31300 LOC_Os03g56300 LOC_Os03g09210 LOC_Os05g45730 LOC_Os07g45090 LOC_Os05g23620 LOC_Os06g50000 LOC_Os05g31290 LOC_Os10g17280 LOC_Os03g19890 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4302 PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03770.1 |
| Rice Genome Annotation | LOC_Os03g03770.1 |
| Ricechip | LOC_Os03g03770.1 |
| KEGG | osa:4331499 dosa:Os03t0129900-01 |
| Entrez-Gene | 4331499 |