RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04240.1 View Network Show in Genome Browser |
| Other Names | Os03g0135100 |
| Description | glutathione S-transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1948315-1949543 Nucleotide Length: 678 |
| Protein-coding | LOC_Os03g04240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21460 LOC_Os02g43850 LOC_Os01g27630 LOC_Os02g47940 LOC_Os02g12794 LOC_Os02g12800 LOC_Os01g27390 LOC_Os02g08480 LOC_Os03g04220 LOC_Os02g26814 LOC_Os01g55830 More.. |
| Downstream Genes | LOC_Os04g38450 LOC_Os03g53400 LOC_Os04g41960 LOC_Os06g12580 LOC_Os06g37440 LOC_Os10g42250 LOC_Os07g08070 LOC_Os03g58150 LOC_Os07g08840 LOC_Os03g58630 LOC_Os04g46930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04240.1 |
| Rice Genome Annotation | LOC_Os03g04240.1 |
| Ricechip | LOC_Os03g04240.1 |
| KEGG | osa:4331533 dosa:Os03t0135100-01 |
| Entrez-Gene | 4331533 |