RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05980.1 View Network Show in Genome Browser |
| Other Names | Os03g0154700 |
| Description | 40S ribosomal protein S9-2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2986017-2989284 Nucleotide Length: 588 |
| Protein-coding | LOC_Os03g05980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g04750 LOC_Os02g14059 LOC_Os03g04590 LOC_Os02g56960 LOC_Os01g10820 LOC_Os02g06700 LOC_Os02g33140 LOC_Os02g47140 LOC_Os02g18380 LOC_Os02g34460 LOC_Os02g30050 More.. |
| Downstream Genes | LOC_Os06g02510 LOC_Os03g37970 LOC_Os04g42380 LOC_Os10g32820 LOC_Os07g42950 LOC_Os10g32920 LOC_Os06g35730 LOC_Os05g11710 LOC_Os08g10608 LOC_Os07g07709 LOC_Os03g58050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05980.1 |
| Rice Genome Annotation | LOC_Os03g05980.1 |
| Ricechip | LOC_Os03g05980.1 |
| KEGG | osa:4331662 dosa:Os03t0154700-01 |
| Entrez-Gene | 4331662 |