RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06760.1 View Network Show in Genome Browser |
| Other Names | Os03g0163500 |
| Description | exocyst complex component 6, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3435024-3439544 Nucleotide Length: 2367 |
| Protein-coding | LOC_Os03g06760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51430 LOC_Os01g69230 LOC_Os02g25580 LOC_Os02g30230 LOC_Os02g12380 LOC_Os02g12350 LOC_Os02g50370 LOC_Os02g45120 LOC_Os02g26814 LOC_Os01g53250 LOC_Os01g66580 More.. |
| Downstream Genes | LOC_Os12g13590 LOC_Os07g09680 LOC_Os06g04450 LOC_Os04g13470 LOC_Os07g13530 LOC_Os03g60530 LOC_Os05g38630 LOC_Os06g38470 LOC_Os04g18030 LOC_Os04g31330 LOC_Os11g01420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5543 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06760.1 |
| Rice Genome Annotation | LOC_Os03g06760.1 |
| Ricechip | LOC_Os03g06760.1 |
| KEGG | osa:4331721 dosa:Os03t0163500-01 |
| Entrez-Gene | 4331721 |