RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g11670.1 View Network Show in Genome Browser |
| Other Names | Os03g0215900 |
| Description | pentatricopeptide repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6089248-6091523 Nucleotide Length: 2031 |
| Protein-coding | LOC_Os03g11670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02770 LOC_Os02g30050 LOC_Os02g41590 LOC_Os01g54870 LOC_Os02g56990 LOC_Os02g02130 LOC_Os01g59990 LOC_Os02g47140 LOC_Os01g61814 LOC_Os01g12530 LOC_Os02g07890 More.. |
| Downstream Genes | LOC_Os04g36058 LOC_Os03g31090 LOC_Os07g10660 LOC_Os07g05580 LOC_Os08g44480 LOC_Os03g29460 LOC_Os07g08330 LOC_Os05g40820 LOC_Os08g03450 LOC_Os07g42450 LOC_Os03g60400 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g11670.1 |
| Rice Genome Annotation | LOC_Os03g11670.1 |
| Ricechip | LOC_Os03g11670.1 |
| KEGG | osa:4332063 dosa:Os03t0215900-00 |
| Entrez-Gene | 4332063 |