RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12250.1 View Network Show in Genome Browser |
| Other Names | Os03g0223000 |
| Description | atypical receptor-like kinase MARK, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6434790-6438530 Nucleotide Length: 2028 |
| Protein-coding | LOC_Os03g12250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59150 LOC_Os02g05630 LOC_Os01g11010 LOC_Os01g73980 LOC_Os01g02940 LOC_Os01g51840 LOC_Os02g33550 LOC_Os01g16030 LOC_Os02g15594 LOC_Os02g16500 LOC_Os02g55560 More.. |
| Downstream Genes | LOC_Os03g44560 LOC_Os07g44350 LOC_Os05g03174 LOC_Os05g08370 LOC_Os05g32110 LOC_Os05g01810 LOC_Os06g36050 LOC_Os08g35710 LOC_Os07g27810 LOC_Os05g44070 LOC_Os03g45920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12250.1 |
| Rice Genome Annotation | LOC_Os03g12250.1 |
| Ricechip | LOC_Os03g12250.1 |
| KEGG | osa:4332106 dosa:Os03t0223000-02 |
| Entrez-Gene | 4332106 |