RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15780.1 View Network Show in Genome Browser |
| Other Names | Os03g0264400 |
| Description | anthranilate synthase component I-1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8702788-8707276 Nucleotide Length: 1821 |
| Protein-coding | LOC_Os03g15780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03450 LOC_Os02g03850 LOC_Os02g16630 LOC_Os01g43020 LOC_Os01g18860 LOC_Os01g46570 LOC_Os01g68950 LOC_Os01g68940 LOC_Os01g22010 LOC_Os03g02680 LOC_Os01g55870 More.. |
| Downstream Genes | LOC_Os03g50880 LOC_Os04g38950 LOC_Os09g08130 LOC_Os08g23150 LOC_Os04g39270 LOC_Os08g04180 LOC_Os06g48620 LOC_Os03g58260 LOC_Os07g08430 LOC_Os07g01870 LOC_Os03g58290 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5340 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00400 rn01100 rn01110 |
| Metacyc Pathways | TRPSYN-PWY PWY-6660 PWY-6661 PWY-5958 |
| Reference | |
|---|---|
| PubMed | 11500548 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15780.1 |
| Rice Genome Annotation | LOC_Os03g15780.1 |
| Ricechip | LOC_Os03g15780.1 |
| KEGG | osa:4332341 dosa:Os03t0264400-01 |
| Entrez-Gene | 4332341 |