RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g16110.1 View Network Show in Genome Browser |
| Other Names | Os03g0268000 |
| Description | Ser/Thr protein phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8884166-8889707 Nucleotide Length: 969 |
| Protein-coding | LOC_Os03g16110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13640 LOC_Os01g72220 LOC_Os02g38980 LOC_Os01g09460 LOC_Os02g39030 LOC_Os03g15430 LOC_Os02g16550 LOC_Os02g12580 LOC_Os03g13540 LOC_Os01g54870 LOC_Os01g63270 More.. |
| Downstream Genes | LOC_Os05g23610 LOC_Os05g46570 LOC_Os04g18010 LOC_Os03g63590 LOC_Os10g29560 LOC_Os06g21470 LOC_Os09g39590 LOC_Os12g07050 LOC_Os04g22860 LOC_Os05g18774 LOC_Os03g55620 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g16110.1 |
| Rice Genome Annotation | LOC_Os03g16110.1 |
| Ricechip | LOC_Os03g16110.1 |
| KEGG | osa:4332369 dosa:Os03t0268000-01 |
| Entrez-Gene | 4332369 |