RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18410.1 View Network Show in Genome Browser |
| Other Names | Os03g0295400 |
| Description | DNA-directed RNA polymerase subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10320222-10324857 Nucleotide Length: 1140 |
| Protein-coding | LOC_Os03g18410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59140 LOC_Os01g66580 LOC_Os01g43020 LOC_Os02g37870 LOC_Os02g50370 LOC_Os03g05720 LOC_Os03g02110 LOC_Os02g06700 LOC_Os02g33140 LOC_Os01g40340 LOC_Os03g05980 More.. |
| Downstream Genes | LOC_Os12g09280 LOC_Os10g35290 LOC_Os03g28960 LOC_Os04g41490 LOC_Os07g27930 LOC_Os11g08940 LOC_Os03g38960 LOC_Os10g25110 LOC_Os12g36950 LOC_Os03g50380 LOC_Os06g09570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18410.1 |
| Rice Genome Annotation | LOC_Os03g18410.1 |
| Ricechip | LOC_Os03g18410.1 |
| KEGG | osa:4332531 dosa:Os03t0295400-01 |
| Entrez-Gene | 4332531 |