RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os03g19350.1 View Network Show in Genome Browser |
Other Names | Os03g0306400 |
Description | OsLonP1 - Putative Lon protease homologue, expressed |
Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10887716-10898989 Nucleotide Length: 2847 |
Protein-coding | LOC_Os03g19350 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0019538 | protein metabolic process | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0003723 | RNA binding | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005739 | mitochondrion | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g66330 LOC_Os02g35630 LOC_Os02g19150 LOC_Os02g42290 LOC_Os01g32350 LOC_Os01g16530 LOC_Os03g05730 LOC_Os03g15810 LOC_Os02g11050 LOC_Os02g21970 LOC_Os02g54340 More.. |
Downstream Genes | LOC_Os05g45750 LOC_Os04g44400 LOC_Os06g20320 LOC_Os03g19510 LOC_Os10g43050 LOC_Os12g10590 LOC_Os03g29810 LOC_Os06g04530 LOC_Os03g22430 LOC_Os05g44310 LOC_Os08g15270 More.. |
Pathways | |
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KEGG Pathways | rn00400 rn01100 rn01110 |
Metacyc Pathways | ARO-PWY |
Database Links | |
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Gramene | LOC_Os03g19350.1 |
Rice Genome Annotation | LOC_Os03g19350.1 |
Ricechip | LOC_Os03g19350.1 |
KEGG | osa:4332601 dosa:Os03t0306400-01 |
Entrez-Gene | 4332601 |