RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22730.1 View Network Show in Genome Browser |
| Other Names | Os03g0350100 |
| Description | nucleolar protein NOP5-1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13126451-13129893 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os03g22730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57590 LOC_Os02g49270 LOC_Os03g22350 LOC_Os02g39700 LOC_Os02g46990 LOC_Os03g19960 LOC_Os02g37870 LOC_Os03g13800 LOC_Os02g41590 LOC_Os03g21530 LOC_Os02g05330 More.. |
| Downstream Genes | LOC_Os03g22880 LOC_Os04g42010 LOC_Os05g08360 LOC_Os03g25450 LOC_Os08g31810 LOC_Os09g37860 LOC_Os04g50660 LOC_Os07g44190 LOC_Os05g49150 LOC_Os03g58720 LOC_Os03g42770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22730.1 |
| Rice Genome Annotation | LOC_Os03g22730.1 |
| Ricechip | LOC_Os03g22730.1 |
| KEGG | osa:4332840 dosa:Os03t0350100-02 |
| Entrez-Gene | 4332840 |