RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g22810.1 View Network Show in Genome Browser
Other Names	Os03g0351500
Description	copper/zinc superoxide dismutase, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 13179170-13184591 Nucleotide Length: 813
Protein-coding	LOC_Os03g22810

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005576	extracellular region	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g05670 LOC_Os02g53420 LOC_Os03g03910 LOC_Os02g07490 LOC_Os03g16920 LOC_Os03g02260 LOC_Os02g44470 LOC_Os02g02400 LOC_Os01g62290 LOC_Os03g16860 LOC_Os01g13760 More..
Downstream Genes	LOC_Os05g25850 LOC_Os06g36700 LOC_Os12g43630 LOC_Os11g04070 LOC_Os08g03640 LOC_Os06g23160 LOC_Os12g03880 LOC_Os06g12530 LOC_Os03g43890 LOC_Os04g48410 LOC_Os12g43340 More..

miRNA Regulations
miRNAs	osa-miR1847.1

Pathways
Metacyc Pathways	DETOX1-PWY

Database Links
Gramene	LOC_Os03g22810.1
Rice Genome Annotation	LOC_Os03g22810.1
Ricechip	LOC_Os03g22810.1
KEGG	osa:4332846 dosa:Os03t0351500-01
Entrez-Gene	4332846