RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22880.1 View Network Show in Genome Browser |
| Other Names | Os03g0352300 |
| Description | nucleolar protein 5A, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13222530-13225476 Nucleotide Length: 1659 |
| Protein-coding | LOC_Os03g22880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22740 LOC_Os03g22730 LOC_Os02g57590 LOC_Os02g49270 LOC_Os02g05330 LOC_Os03g22350 LOC_Os02g37870 LOC_Os03g19960 LOC_Os01g51620 LOC_Os01g37770 LOC_Os01g34200 More.. |
| Downstream Genes | LOC_Os05g08360 LOC_Os03g25450 LOC_Os04g42010 LOC_Os08g31810 LOC_Os06g48750 LOC_Os10g31520 LOC_Os09g37860 LOC_Os03g49210 LOC_Os07g44190 LOC_Os07g20580 LOC_Os06g06410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22880.1 |
| Rice Genome Annotation | LOC_Os03g22880.1 |
| Ricechip | LOC_Os03g22880.1 |
| KEGG | osa:4332851 dosa:Os03t0352300-01 |
| Entrez-Gene | 4332851 |