RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22890.1 View Network Show in Genome Browser |
| Other Names | Os03g0352400 |
| Description | GTPase of unknown function domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13227286-13232101 Nucleotide Length: 1608 |
| Protein-coding | LOC_Os03g22890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02420 LOC_Os01g57910 LOC_Os01g27730 LOC_Os03g22350 LOC_Os01g33030 LOC_Os01g40340 LOC_Os01g67134 LOC_Os01g65220 LOC_Os02g02360 LOC_Os02g50370 LOC_Os01g33050 More.. |
| Downstream Genes | LOC_Os03g49210 LOC_Os06g09570 LOC_Os05g01990 LOC_Os10g35280 LOC_Os07g01920 LOC_Os07g47580 LOC_Os07g29320 LOC_Os03g25620 LOC_Os04g58830 LOC_Os10g01540 LOC_Os05g28320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22890.1 |
| Rice Genome Annotation | LOC_Os03g22890.1 |
| Ricechip | LOC_Os03g22890.1 |
| KEGG | osa:4332852 dosa:Os03t0352400-01 |
| Entrez-Gene | 4332852 |