RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25450.1 View Network Show in Genome Browser |
| Other Names | Os03g0370500 |
| Description | h/ACA ribonucleoprotein complex subunit 4, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14545715-14547929 Nucleotide Length: 1776 |
| Protein-coding | LOC_Os03g25450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22740 LOC_Os03g22880 LOC_Os03g22730 LOC_Os03g22350 LOC_Os02g57590 LOC_Os02g49270 LOC_Os02g40460 LOC_Os02g55940 LOC_Os03g19960 LOC_Os02g39700 LOC_Os01g56620 More.. |
| Downstream Genes | LOC_Os04g42010 LOC_Os05g08360 LOC_Os03g49210 LOC_Os05g51500 LOC_Os07g20580 LOC_Os07g10350 LOC_Os11g37080 LOC_Os10g31520 LOC_Os09g37860 LOC_Os06g04610 LOC_Os07g07310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25450.1 |
| Rice Genome Annotation | LOC_Os03g25450.1 |
| Ricechip | LOC_Os03g25450.1 |
| KEGG | osa:4332935 dosa:Os03t0370500-02 |
| Entrez-Gene | 4332935 |