RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os03g27260.1 View Network Show in Genome Browser |
Other Names | Os03g0390000 |
Description | 40S ribosomal protein S6, putative, expressed |
Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 15622131-15624526 Nucleotide Length: 738 |
Protein-coding | LOC_Os03g27260 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009790 | embryo development | Biological Process | IEA | |
GO:0040007 | growth | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0000003 | reproduction | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g61814 LOC_Os03g10340 LOC_Os01g62350 LOC_Os03g18570 LOC_Os02g18550 LOC_Os02g47140 LOC_Os03g18580 LOC_Os02g14059 LOC_Os01g59990 LOC_Os01g19840 LOC_Os01g10820 More.. |
Downstream Genes | LOC_Os03g60400 LOC_Os05g38520 LOC_Os12g21798 LOC_Os04g50990 LOC_Os04g39700 LOC_Os05g27940 LOC_Os05g28750 LOC_Os05g11710 LOC_Os09g31180 LOC_Os06g35730 LOC_Os12g38000 More.. |
Database Links | |
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Gramene | LOC_Os03g27260.1 |
Rice Genome Annotation | LOC_Os03g27260.1 |
Ricechip | LOC_Os03g27260.1 |
KEGG | osa:4333016 dosa:Os03t0390000-02 |
Entrez-Gene | 4333016 |