RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g29460.1 View Network Show in Genome Browser |
| Other Names | Os03g0408300 |
| Description | 60S ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16787178-16787968 Nucleotide Length: 441 |
| Protein-coding | LOC_Os03g29460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60790 LOC_Os01g59990 LOC_Os01g54870 LOC_Os02g54470 LOC_Os01g67134 LOC_Os01g61814 LOC_Os03g21940 LOC_Os01g19840 LOC_Os01g25610 LOC_Os02g01560 LOC_Os02g14059 More.. |
| Downstream Genes | LOC_Os03g59310 LOC_Os05g39960 LOC_Os07g10660 LOC_Os08g03640 LOC_Os06g02510 LOC_Os12g38000 LOC_Os05g48310 LOC_Os05g48220 LOC_Os11g04070 LOC_Os03g38000 LOC_Os12g03880 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g29460.1 |
| Rice Genome Annotation | LOC_Os03g29460.1 |
| Ricechip | LOC_Os03g29460.1 |
| KEGG | osa:4333083 dosa:Os03t0408300-00 |
| Entrez-Gene | 4333083 |