RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g29740.1 View Network Show in Genome Browser |
| Other Names | Os03g0410900 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16941146-16943327 Nucleotide Length: 243 |
| Protein-coding | LOC_Os03g29740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01250 LOC_Os03g13760 LOC_Os02g03440 LOC_Os01g15310 LOC_Os02g14059 LOC_Os01g64690 LOC_Os02g08090 LOC_Os02g37430 LOC_Os01g51020 LOC_Os02g30624 LOC_Os02g57590 More.. |
| Downstream Genes | LOC_Os08g05530 LOC_Os04g39444 LOC_Os11g41610 LOC_Os03g56241 LOC_Os05g32310 LOC_Os11g43620 LOC_Os07g07220 LOC_Os12g38000 LOC_Os05g08360 LOC_Os08g02410 LOC_Os09g39500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g29740.1 |
| Rice Genome Annotation | LOC_Os03g29740.1 |
| Ricechip | LOC_Os03g29740.1 |
| KEGG | osa:4333092 dosa:Os03t0410900-01 |
| Entrez-Gene | 4333092 |