RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g39000.1 View Network Show in Genome Browser |
| Other Names | Os03g0587000 |
| Description | inositol-1-monophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 21681949-21685051 Nucleotide Length: 825 |
| Protein-coding | LOC_Os03g39000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64660 LOC_Os03g14380 LOC_Os02g39350 LOC_Os01g47340 LOC_Os03g16210 LOC_Os02g32030 LOC_Os03g30300 LOC_Os03g25070 LOC_Os01g67860 LOC_Os01g02880 LOC_Os01g16890 More.. |
| Downstream Genes | LOC_Os05g36270 LOC_Os10g07994 LOC_Os10g25320 LOC_Os09g16910 LOC_Os07g12110 LOC_Os12g08280 LOC_Os10g37660 LOC_Os04g54330 LOC_Os06g11790 LOC_Os12g08270 LOC_Os03g51150 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00562 rn01100 rn00521 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g39000.1 |
| Rice Genome Annotation | LOC_Os03g39000.1 |
| Ricechip | LOC_Os03g39000.1 |
| KEGG | osa:4333347 dosa:Os03t0587000-01 |
| Entrez-Gene | 4333347 |