RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40400.1 View Network Show in Genome Browser |
| Other Names | |
| Description | interferon-induced, double-stranded RNA-activated protein kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22445964-22447733 Nucleotide Length: 885 |
| Protein-coding | LOC_Os03g40400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37770 LOC_Os02g05630 LOC_Os02g58020 LOC_Os03g18510 LOC_Os03g38980 LOC_Os01g65230 LOC_Os02g15594 LOC_Os01g51200 LOC_Os02g56740 LOC_Os02g55560 LOC_Os03g17980 More.. |
| Downstream Genes | LOC_Os03g51140 LOC_Os03g44310 LOC_Os12g31380 LOC_Os10g25320 LOC_Os04g35260 LOC_Os12g42260 LOC_Os04g56450 LOC_Os04g37904 LOC_Os06g48300 LOC_Os07g32380 LOC_Os05g45420 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40400.1 |
| Rice Genome Annotation | LOC_Os03g40400.1 |
| Ricechip | LOC_Os03g40400.1 |