RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50620.1 View Network Show in Genome Browser |
| Other Names | Os03g0714400 |
| Description | ATP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28901044-28906929 Nucleotide Length: 801 |
| Protein-coding | LOC_Os03g50620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19870 LOC_Os01g61814 LOC_Os03g14530 LOC_Os02g47140 LOC_Os01g22490 LOC_Os02g48660 LOC_Os02g14059 LOC_Os03g18580 LOC_Os03g18570 LOC_Os02g27760 LOC_Os01g59990 More.. |
| Downstream Genes | LOC_Os03g60400 LOC_Os11g05562 LOC_Os08g44480 LOC_Os09g39540 LOC_Os07g12250 LOC_Os04g50990 LOC_Os05g48310 LOC_Os05g48220 LOC_Os08g39500 LOC_Os10g08930 LOC_Os05g40820 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR812f osa-miR812g osa-miR812h osa-miR812i osa-miR812j osa-miR812n-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50620.1 |
| Rice Genome Annotation | LOC_Os03g50620.1 |
| Ricechip | LOC_Os03g50620.1 |
| KEGG | osa:4333905 dosa:Os03t0714400-01 |
| Entrez-Gene | 4333905 |