RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g56460.1 View Network Show in Genome Browser
Other Names	Os03g0776000
Description	glucose-6-phosphate isomerase, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 32175133-32182101 Nucleotide Length: 1704
Protein-coding	LOC_Os03g56460

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006091	generation of precursor metabolites and energy	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g73310 LOC_Os03g18220 LOC_Os01g67860 LOC_Os01g51380 LOC_Os01g53680 LOC_Os02g38920 LOC_Os01g09460 LOC_Os01g64660 LOC_Os02g07260 LOC_Os03g27290 LOC_Os01g52450 More..
Downstream Genes	LOC_Os09g30418 LOC_Os09g30412 LOC_Os09g20820 LOC_Os08g39140 LOC_Os05g01600 LOC_Os05g09500 LOC_Os06g37180 LOC_Os05g45590 LOC_Os11g06390 LOC_Os05g39310 LOC_Os05g39320 More..

miRNA Regulations
miRNAs	osa-miR5156

Pathways
KEGG Pathways	rn00010 rn00030 rn01100 rn01110 rn01120 rn00500 rn00520
Metacyc Pathways	PWY-3801 P124-PWY PWY-622 GLUCONEO-PWY PWY-621 PWY-882 GLYCOLYSIS

Database Links
Gramene	LOC_Os03g56460.1
Rice Genome Annotation	LOC_Os03g56460.1
Ricechip	LOC_Os03g56460.1
KEGG	osa:4334290 dosa:Os03t0776000-01
Entrez-Gene	4334290