RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63400.1 View Network Show in Genome Browser |
| Other Names | Os03g0851000 |
| Description | transcription factor BTF3, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35822112-35824358 Nucleotide Length: 477 |
| Protein-coding | LOC_Os03g63400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71230 LOC_Os03g02960 LOC_Os02g27760 LOC_Os03g40180 LOC_Os01g73160 LOC_Os03g58430 LOC_Os02g28810 LOC_Os03g10340 LOC_Os01g60790 LOC_Os01g10820 LOC_Os03g18570 More.. |
| Downstream Genes | LOC_Os05g31000 LOC_Os11g11390 LOC_Os07g10720 LOC_Os05g11710 LOC_Os08g06040 LOC_Os07g12250 LOC_Os04g50990 LOC_Os08g10608 LOC_Os08g02410 LOC_Os10g41410 LOC_Os04g51630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63400.1 |
| Rice Genome Annotation | LOC_Os03g63400.1 |
| Ricechip | LOC_Os03g63400.1 |
| KEGG | osa:4334799 dosa:Os03t0851000-01 |
| Entrez-Gene | 4334799 |