RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63410.1 View Network Show in Genome Browser |
| Other Names | Os03g0851100 |
| Description | elongation factor Tu, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35826263-35830205 Nucleotide Length: 1362 |
| Protein-coding | LOC_Os03g63410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g36780 LOC_Os03g14530 LOC_Os03g60400 LOC_Os01g61814 LOC_Os01g14830 LOC_Os03g10060 LOC_Os01g64090 LOC_Os03g52400 LOC_Os03g54040 LOC_Os03g24020 LOC_Os03g03360 More.. |
| Downstream Genes | LOC_Os10g08930 LOC_Os11g37510 LOC_Os06g34780 LOC_Os10g32870 LOC_Os04g45490 LOC_Os12g33240 LOC_Os06g04290 LOC_Os11g29190 LOC_Os06g35470 LOC_Os08g44450 LOC_Os12g38000 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63410.1 |
| Rice Genome Annotation | LOC_Os03g63410.1 |
| Ricechip | LOC_Os03g63410.1 |
| KEGG | osa:4334800 dosa:Os03t0851100-01 |
| Entrez-Gene | 4334800 |