RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g32330.1 View Network Show in Genome Browser |
| Other Names | Os04g0394200 |
| Description | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 19378282-19382778 Nucleotide Length: 1323 |
| Protein-coding | LOC_Os04g32330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32020 LOC_Os01g22520 LOC_Os02g40830 LOC_Os01g23610 LOC_Os02g07410 LOC_Os01g52214 LOC_Os01g06600 LOC_Os01g19450 LOC_Os01g16900 LOC_Os03g03770 LOC_Os01g46070 More.. |
| Downstream Genes | LOC_Os07g49520 LOC_Os05g06750 LOC_Os07g38970 LOC_Os07g04240 LOC_Os08g02640 LOC_Os09g20440 LOC_Os05g45730 LOC_Os05g06460 LOC_Os10g37180 LOC_Os11g47330 LOC_Os11g47120 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00020 rn01100 rn01110 rn01120 rn00310 |
| Metacyc Pathways | PWY-5084 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g32330.1 |
| Rice Genome Annotation | LOC_Os04g32330.1 |
| Ricechip | LOC_Os04g32330.1 |
| KEGG | osa:4335689 dosa:Os04t0394200-01 |
| Entrez-Gene | 4335689 |