RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g35090.1 View Network Show in Genome Browser |
| Other Names | Os04g0430100 |
| Description | 40S ribosomal protein S10, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 21323046-21326956 Nucleotide Length: 552 |
| Protein-coding | LOC_Os04g35090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40880 LOC_Os01g62350 LOC_Os01g54870 LOC_Os01g61814 LOC_Os01g49290 LOC_Os03g60400 LOC_Os02g27760 LOC_Os03g08440 LOC_Os03g37970 LOC_Os02g01332 LOC_Os01g47660 More.. |
| Downstream Genes | LOC_Os11g05562 LOC_Os05g38520 LOC_Os09g24690 LOC_Os08g44480 LOC_Os09g31180 LOC_Os05g48310 LOC_Os05g48220 LOC_Os08g06040 LOC_Os09g39540 LOC_Os07g10720 LOC_Os08g33920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g35090.1 |
| Rice Genome Annotation | LOC_Os04g35090.1 |
| Ricechip | LOC_Os04g35090.1 |
| KEGG | osa:4335865 dosa:Os04t0430100-01 |
| Entrez-Gene | 4335865 |