RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46310.1 View Network Show in Genome Browser |
| Other Names | Os04g0548300 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27455818-27460087 Nucleotide Length: 6429 |
| Protein-coding | LOC_Os04g46310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56390 LOC_Os03g52470 LOC_Os03g05720 LOC_Os02g54110 LOC_Os03g22880 LOC_Os01g08770 LOC_Os02g50370 LOC_Os03g18410 LOC_Os03g21530 LOC_Os01g43020 LOC_Os01g40250 More.. |
| Downstream Genes | LOC_Os07g10350 LOC_Os12g07300 LOC_Os07g12320 LOC_Os10g35290 LOC_Os04g52200 LOC_Os12g29660 LOC_Os08g23730 LOC_Os07g33340 LOC_Os10g25110 LOC_Os12g06910 LOC_Os11g07500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46310.1 |
| Rice Genome Annotation | LOC_Os04g46310.1 |
| Ricechip | LOC_Os04g46310.1 |
| KEGG | osa:4336577 dosa:Os04t0548300-01 |
| Entrez-Gene | 4336577 |