RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os04g50990.1 View Network Show in Genome Browser |
Other Names | Os04g0598200 |
Description | L11 domain containing ribosomal protein, putative, expressed |
Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30180315-30182052 Nucleotide Length: 501 |
Protein-coding | LOC_Os04g50990 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os04g28180 LOC_Os01g67134 LOC_Os01g59990 LOC_Os02g14059 LOC_Os02g28810 LOC_Os01g10820 LOC_Os01g61814 LOC_Os01g54870 LOC_Os03g22180 LOC_Os03g18570 LOC_Os01g64090 More.. |
Downstream Genes | LOC_Os11g29190 LOC_Os05g11710 LOC_Os07g12250 LOC_Os05g30530 LOC_Os06g35730 LOC_Os05g27940 LOC_Os07g42950 LOC_Os05g40820 LOC_Os10g08930 LOC_Os07g10720 LOC_Os08g44450 More.. |
Database Links | |
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Gramene | LOC_Os04g50990.1 |
Rice Genome Annotation | LOC_Os04g50990.1 |
Ricechip | LOC_Os04g50990.1 |
KEGG | osa:4336856 dosa:Os04t0598200-00 |
Entrez-Gene | 4336856 |