RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52370.1 View Network Show in Genome Browser |
| Other Names | Os04g0613700 |
| Description | UTP--glucose-1-phosphate uridylyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31108920-31113473 Nucleotide Length: 1482 |
| Protein-coding | LOC_Os04g52370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57290 LOC_Os02g02560 LOC_Os04g25550 LOC_Os03g12250 LOC_Os03g46640 LOC_Os03g14610 LOC_Os04g43650 LOC_Os03g28330 LOC_Os01g51840 LOC_Os03g41100 LOC_Os04g51920 More.. |
| Downstream Genes | LOC_Os09g38030 LOC_Os07g09720 LOC_Os05g02820 LOC_Os05g44070 LOC_Os06g36050 LOC_Os05g41990 LOC_Os12g03720 LOC_Os09g31310 LOC_Os11g03900 LOC_Os12g20324 LOC_Os08g39300 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn01100 rn01110 |
| Metacyc Pathways | UDPNACETYLGALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52370.1 |
| Rice Genome Annotation | LOC_Os04g52370.1 |
| Ricechip | LOC_Os04g52370.1 |
| KEGG | osa:4336977 dosa:Os04t0613700-02 |
| Entrez-Gene | 4336977 |