RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52960.1 View Network Show in Genome Browser |
| Other Names | Os04g0620700 |
| Description | nucleolin, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31544124-31551241 Nucleotide Length: 2124 |
| Protein-coding | LOC_Os04g52960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42010 LOC_Os02g03890 LOC_Os02g39700 LOC_Os02g02360 LOC_Os02g02850 LOC_Os03g18840 LOC_Os03g21530 LOC_Os03g42220 LOC_Os03g22740 LOC_Os03g10940 LOC_Os03g21940 More.. |
| Downstream Genes | LOC_Os07g15880 LOC_Os07g10350 LOC_Os07g02350 LOC_Os08g09350 LOC_Os08g05840 LOC_Os05g40820 LOC_Os11g03400 LOC_Os09g32976 LOC_Os08g23710 LOC_Os08g10649 LOC_Os07g23110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52960.1 |
| Rice Genome Annotation | LOC_Os04g52960.1 |
| Ricechip | LOC_Os04g52960.1 |
| KEGG | osa:4337032 dosa:Os04t0620700-01 |
| Entrez-Gene | 4337032 |