RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01810.1 View Network Show in Genome Browser |
| Other Names | Os05g0108600 |
| Description | xylem cysteine proteinase 2 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 486053-488406 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os05g01810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73980 LOC_Os03g12250 LOC_Os01g73990 LOC_Os03g14170 LOC_Os03g44560 LOC_Os02g43660 LOC_Os01g11010 LOC_Os01g04720 LOC_Os03g18454 LOC_Os03g14610 LOC_Os01g47080 More.. |
| Downstream Genes | LOC_Os06g36050 LOC_Os07g01370 LOC_Os05g11990 LOC_Os05g04820 LOC_Os05g02820 LOC_Os05g24550 LOC_Os12g01560 LOC_Os11g01570 LOC_Os06g43620 LOC_Os05g13900 LOC_Os07g44350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01810.1 |
| Rice Genome Annotation | LOC_Os05g01810.1 |
| Ricechip | LOC_Os05g01810.1 |
| KEGG | osa:4337582 dosa:Os05t0108600-01 |
| Entrez-Gene | 4337582 |